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+---
+title: install RFantibody
+date: 2026-03-12
+tags: [antibody, soft insatll]
+collections: [antibody, install]
+---
+# install RFantibody
+```shell
+# dir: /share/nas3/zhushixin/soft/unzip/RFantibody
+git clone ssh://git@39.104.92.69:8512/pub_soft/RFantibody.git
+
+# download weight
+bash include/download_weights.sh
+
+mamba create -n rfanibody
+mamba activate  rfanibody
+mamba install python=3.10
+
+pip install --pre torch torchvision torchaudio --index-url https://download.pytorch.org/whl/nightly/cu128
+pip install --pre dgl --no-deps -f https://data.dgl.ai/wheels-test/torch-2.4/cu124/repo.html
+
+
+# 安装依赖
+pip install .
+pip install omegaconf
+# pip install hydra-core==1.3.2
+pip install hydra
+pip install scipy
+
+# test
+python  /home/src/rfantibody/rfdiffusion/rfdiffusion_inference.py \
+    --config-name antibody \
+    antibody.target_pdb=/home/scripts/examples/example_inputs/rsv_site3.pdb \
+    antibody.framework_pdb=/home/scripts/examples/example_inputs/hu-4D5-8_Fv.pdb \
+    inference.ckpt_override_path=/home/weights/RFdiffusion_Ab.pt \
+    'ppi.hotspot_res=[T305,T456]' \
+    'antibody.design_loops=[L1:8-13,L2:7,L3:9-11,H1:7,H2:6,H3:5-13]' \
+    inference.num_designs=20 \
+    inference.output_prefix=/home/scripts/examples/example_outputs/ab_des
+#faild
+```
+
+# gpu0
+```shell
+# dir: /share/nas3/zhushixin/soft/gpu0_soft/RFantibody
+git clone ssh://git@39.104.92.69:8512/pub_soft/RFantibody.git
+
+# download weight
+bash include/download_weights.sh
+
+# test 
+docker run --gpus '"device=1"' -it --rm 36d3aa0632ed
+
+
+
+
+```
+
+# gpu0
+```shell
+# dir: /share/nas3/zhushixin/soft/gpu0_soft/RFantibody
+git clone ssh://git@39.104.92.69:8512/pub_soft/RFantibody.git
+
+# download weight
+bash include/download_weights.sh
+
+mamba activate uv
+uv sync
+```
+test
+```shell
+# test
+ bash scripts/examples/nanobody_full_pipeline.sh
+
+# 查看设计结果
+qvls scripts/examples/example_outputs/nb_ha_pipeline/2_proteinmpnn.qv
+mkdir check_install
+## split结果
+qvextract  scripts/examples/example_outputs/nb_ha_pipeline/3_rf2.qv -o check_install/
+## 提取分数文件
+qvscorefile scripts/examples/example_outputs/nb_ha_pipeline/3_rf2.qv
+cp scripts/examples/example_outputs/nb_ha_pipeline/3_rf2.sc check_install/3_rf2.tsv
+
+
+```